Model Initialization and Visualization
You can download the XML specifications for this model here:
Similar to the single SAC example, model Initialization is done using:
# Parse model specifications from the meta-parameters XML file
simulation_parameters = SimulationParameters(
"simulation_parameters/plexus_SAC_meta.xml",
note = 'plexus_SAC')
# Use the model specification to initiate a new simulation
simulation = Simulation(simulation_parameters)
Plot the modeled network morphology:
simulation.plot_morphologies()

Get the soma plot:
simulation.plot_morphologies(soma_plt = True)

The synapse distribution:

Note that BC-SAC synapses are colored in red and SAC-SAC are colored in yellow-green, indicating pre-post synaptic connections.
Similar to a single SAC, you can plot the channel distribution. RSME will generate a plot for each SAC.
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