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Retinal Stimulation Modeling Environment
  • Retinal Stimulation Modeling Environment (RSME)
  • Preliminaries
    • Python
    • NEURON
    • Systems Biology Markup Language
    • RSME and Model initialization
  • Model specification
    • Meta-parameters
    • Morphology Description
    • Network Description
    • Visual Stimulation
    • Biophysical Description
  • Visual Stimulation
  • Single SAC model
    • Model Initialization
    • Model Visualization
    • Model Simulation
  • SAC plexus model
    • Before we begin
    • Model Initialization and Visualization
    • Model Simulation
  • SAC-DSGC network
    • Model initialization and visualization
    • Model Simulation
  • Logger
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  1. Preliminaries

Python

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Last updated 3 years ago

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RSME was written in Python. We recommend installing the Anaconda distribution of Python version > 3.8. It is freely available for individual use in:

Read about the advantages of using Python in neuroscientific research in:

Python documentation is available in:

We recommend installing all dependencies in a dedicated Conda environment. Learn about Conda environments in:

Briefly, using your terminal or command line, create an environment using:

conda create --name RSME --clone base

and activate it using:

conda activate RSME

3.10.2 Documentation
Managing environments — conda 4.11.0.post25+fc56fdeb2 documentation
Anaconda | Individual EditionAnaconda
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Python in neuroscienceFrontiers
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